Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Chst10 MGP_PahariEiJ_G0027312

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Description

carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:110321823]

Location

Chromosome 5: 19,438,897-19,468,531 reverse strand.

PAHARI_EIJ_v1.1:LT608292.1

About this gene

This gene has 7 transcripts (splice variants), 201 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0072629.1	Chst10-201	3077	374aa	MGP_PahariEiJ_P0072629	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0072631.1	Chst10-203	2998	370aa	MGP_PahariEiJ_P0072631	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0072633.1	Chst10-205	707	64aa	MGP_PahariEiJ_P0072633	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0072632.1	Chst10-204	2333	77aa	MGP_PahariEiJ_P0072632	Nonsense mediated decay	-
MGP_PahariEiJ_T0072630.1	Chst10-202	1070	242aa	MGP_PahariEiJ_P0072630	Nonsense mediated decay	-
MGP_PahariEiJ_T0072634.1	Chst10-206	5336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0072635.1	Chst10-207	4119	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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