Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Egfem1 MGP_PahariEiJ_G0026343

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Description

EGF-like and EMI domain-containing protein 1 [Source:NCBI gene;Acc:110320670]

Location

Chromosome 4: 23,864,806-24,434,965 forward strand.

PAHARI_EIJ_v1.1:LT608287.1

About this gene

This gene has 8 transcripts (splice variants), 64 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0068145.1	Egfem1-205	1776	532aa	MGP_PahariEiJ_P0068145	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0068144.1	Egfem1-204	2663	589aa	MGP_PahariEiJ_P0068144	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068148.1	Egfem1-208	730	242aa	MGP_PahariEiJ_P0068148	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068142.1	Egfem1-202	559	176aa	MGP_PahariEiJ_P0068142	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068141.1	Egfem1-201	538	125aa	MGP_PahariEiJ_P0068141	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0068147.1	Egfem1-207	276	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0068143.1	Egfem1-203	2729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0068146.1	Egfem1-206	1728	575aa	MGP_PahariEiJ_P0068146	Unknown likely coding	-

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Summary

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