Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Acss2 MGP_PahariEiJ_G0025975

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Description

acyl-CoA synthetase short chain family member 2 [Source:NCBI gene;Acc:110317693]

Location

Chromosome 3: 137,886,511-137,953,079 forward strand.

PAHARI_EIJ_v1.1:LT608290.1

About this gene

This gene has 10 transcripts (splice variants), 216 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0066472.1	Acss2-206	2145	714aa	MGP_PahariEiJ_P0066472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0066469.1	Acss2-203	2863	705aa	MGP_PahariEiJ_P0066469	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0066474.1	Acss2-208	879	292aa	MGP_PahariEiJ_P0066474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0066471.1	Acss2-205	1646	124aa	MGP_PahariEiJ_P0066471	Nonsense mediated decay	-
MGP_PahariEiJ_T0066479.1	Acss2-209	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0066470.1	Acss2-204	3573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0066468.1	Acss2-202	3224	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0066480.1	Acss2-210	636	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0066473.1	Acss2-207	445	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0066467.1	Acss2-201	3256	701aa	MGP_PahariEiJ_P0066467	Unknown likely coding	-

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Summary

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