Description
paired box 6 [Source:NCBI gene;Acc:110319652]
Location
Chromosome 3: 89,762,566-89,791,087 forward strand.
PAHARI_EIJ_v1.1:LT608290.1
About this gene
This gene has 26 transcripts (splice variants), 228 orthologues and 46 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | Flags |
|---|---|---|---|---|---|---|
| MGP_PahariEiJ_T0064481.1 | Pax6-211 | 2869 | 436aa | MGP_PahariEiJ_P0064481 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_PahariEiJ_T0064475.1 | Pax6-205 | 4322 | 252aa | MGP_PahariEiJ_P0064475 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064479.1 | Pax6-209 | 3130 | 422aa | MGP_PahariEiJ_P0064479 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064484.1 | Pax6-214 | 3110 | 422aa | MGP_PahariEiJ_P0064484 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064483.1 | Pax6-213 | 2864 | 436aa | MGP_PahariEiJ_P0064483 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064480.1 | Pax6-210 | 2834 | 436aa | MGP_PahariEiJ_P0064480 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064471.1 | Pax6-201 | 2593 | 436aa | MGP_PahariEiJ_P0064471 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064472.1 | Pax6-202 | 2551 | 422aa | MGP_PahariEiJ_P0064472 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064482.1 | Pax6-212 | 2426 | 422aa | MGP_PahariEiJ_P0064482 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064485.1 | Pax6-215 | 1637 | 139aa | MGP_PahariEiJ_P0064485 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064474.1 | Pax6-204 | 525 | 17aa | MGP_PahariEiJ_P0064474 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0064495.1 | Pax6-225 | 2148 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064473.1 | Pax6-203 | 975 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064488.1 | Pax6-218 | 924 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064491.1 | Pax6-221 | 879 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064489.1 | Pax6-219 | 869 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064476.1 | Pax6-206 | 825 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064493.1 | Pax6-223 | 776 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064492.1 | Pax6-222 | 742 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064486.1 | Pax6-216 | 654 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064477.1 | Pax6-207 | 608 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0064490.1 | Pax6-220 | 2901 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0064487.1 | Pax6-217 | 2319 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0064494.1 | Pax6-224 | 1082 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0064478.1 | Pax6-208 | 541 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0064496.1 | Pax6-226 | 524 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
