Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Abcc1 MGP_PahariEiJ_G0016186

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Description

ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:110329472]

Location

Chromosome 12: 10,334,453-10,446,634 forward strand.

PAHARI_EIJ_v1.1:LT608305.1

About this gene

This gene has 11 transcripts (splice variants), 201 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0027881.1	Abcc1-204	6772	1527aa	MGP_PahariEiJ_P0027881	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0027883.1	Abcc1-206	614	199aa	MGP_PahariEiJ_P0027883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027882.1	Abcc1-205	603	194aa	MGP_PahariEiJ_P0027882	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027884.1	Abcc1-207	390	103aa	MGP_PahariEiJ_P0027884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027880.1	Abcc1-203	4935	643aa	MGP_PahariEiJ_P0027880	Nonsense mediated decay	-
MGP_PahariEiJ_T0027879.1	Abcc1-202	4908	643aa	MGP_PahariEiJ_P0027879	Nonsense mediated decay	-
MGP_PahariEiJ_T0027878.1	Abcc1-201	4808	643aa	MGP_PahariEiJ_P0027878	Nonsense mediated decay	-
MGP_PahariEiJ_T0027885.1	Abcc1-208	269	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0027886.1	Abcc1-209	3666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027888.1	Abcc1-211	2612	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027887.1	Abcc1-210	1713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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