Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Hmgn3 MGP_PahariEiJ_G0015351

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Description

high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:110327695]

Location

Chromosome 10: 77,470,473-77,506,739 reverse strand.

PAHARI_EIJ_v1.1:LT608289.1

About this gene

This gene has 9 transcripts (splice variants), 125 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0024530.1	Hmgn3-202	856	128aa	MGP_PahariEiJ_P0024530	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0024533.1	Hmgn3-205	1387	95aa	MGP_PahariEiJ_P0024533	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0024531.1	Hmgn3-203	981	99aa	MGP_PahariEiJ_P0024531	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0024532.1	Hmgn3-204	860	77aa	MGP_PahariEiJ_P0024532	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0024536.1	Hmgn3-208	544	95aa	MGP_PahariEiJ_P0024536	Nonsense mediated decay	-
MGP_PahariEiJ_T0024529.1	Hmgn3-201	533	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0024535.1	Hmgn3-207	675	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0024534.1	Hmgn3-206	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0024537.1	Hmgn3-209	256	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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