Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Clip3 MGP_PahariEiJ_G0012745

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Description

CAP-Gly domain containing linker protein 3 [Source:NCBI gene;Acc:110323934]

Location

Chromosome 1: 3,244,519-3,259,919 forward strand.

PAHARI_EIJ_v1.1:LT608296.1

About this gene

This gene has 7 transcripts (splice variants), 181 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0015498.1	Clip3-201	3388	547aa	MGP_PahariEiJ_P0015498	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0015500.1	Clip3-203	559	133aa	MGP_PahariEiJ_P0015500	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0015502.1	Clip3-205	494	84aa	MGP_PahariEiJ_P0015502	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0015501.1	Clip3-204	369	80aa	MGP_PahariEiJ_P0015501	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0015503.1	Clip3-206	661	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0015504.1	Clip3-207	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0015499.1	Clip3-202	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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