Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
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ID History
- Gene history

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Gene: Ankef1 MGP_PahariEiJ_G0025801

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Description

ankyrin repeat and EF-hand domain containing 1 [Source:NCBI gene;Acc:110319351]

Location

Chromosome 3: 119,449,429-119,513,724 forward strand.

PAHARI_EIJ_v1.1:LT608290.1

About this gene

This gene has 10 transcripts (splice variants) and 220 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0065860.1	Ankef1-208	2863	775aa	MGP_PahariEiJ_P0065860	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0065857.1	Ankef1-205	2718	775aa	MGP_PahariEiJ_P0065857	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0065858.1	Ankef1-206	1625	413aa	MGP_PahariEiJ_P0065858	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0065855.1	Ankef1-203	3169	183aa	MGP_PahariEiJ_P0065855	Nonsense mediated decay	-
MGP_PahariEiJ_T0065859.1	Ankef1-207	3074	775aa	MGP_PahariEiJ_P0065859	Nonsense mediated decay	-
MGP_PahariEiJ_T0065853.1	Ankef1-201	2412	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0065856.1	Ankef1-204	945	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0065854.1	Ankef1-202	686	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0065862.1	Ankef1-210	618	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0065861.1	Ankef1-209	370	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data