Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
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ID History
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Gene: Ncaph2 MGP_PahariEiJ_G0020168

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Description

non-SMC condensin II complex subunit H2 [Source:NCBI gene;Acc:110334604]

Location

Chromosome 17: 54,313,120-54,327,728 forward strand.

PAHARI_EIJ_v1.1:LT608298.1

About this gene

This gene has 13 transcripts (splice variants) and 193 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0042809.1	Ncaph2-202	3260	617aa	MGP_PahariEiJ_P0042809	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0042810.1	Ncaph2-203	3257	616aa	MGP_PahariEiJ_P0042810	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0042808.1	Ncaph2-201	3181	585aa	MGP_PahariEiJ_P0042808	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0042811.1	Ncaph2-204	3213	38aa	MGP_PahariEiJ_P0042811	Nonsense mediated decay	-
MGP_PahariEiJ_T0042815.1	Ncaph2-208	878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042814.1	Ncaph2-207	863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042816.1	Ncaph2-209	738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042817.1	Ncaph2-210	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042820.1	Ncaph2-213	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042819.1	Ncaph2-212	616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042812.1	Ncaph2-205	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042813.1	Ncaph2-206	488	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042818.1	Ncaph2-211	477	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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