Transcript: MGP_WSBEiJ_T0077816.1

Description

microphthalmia-associated transcription factor [Source:MGI Symbol;Acc:MGI:104554]

Gene Synonyms

BCC2, Bhlhe32, Gsfbcc2, Vitiligo, Wh, bHLHe32, bw, mi, vit, wh

Location

Chromosome 6: 99,081,838-99,109,304 forward strand.

Reference strain equivalent

Mitf

About this transcript

This transcript has 9 exons and maps to 177 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0030249.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0077812.1	-	4881	526aa	MGP_WSBEiJ_P0077812	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0077813.1	-	2144	510aa	MGP_WSBEiJ_P0077813	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0077814.1	-	2144	501aa	MGP_WSBEiJ_P0077814	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0077810.1	-	2113	520aa	MGP_WSBEiJ_P0077810	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20385, CCDS51861, CCDS51862	A0A0N4SV79 A0A0N4SVJ5 D6RCW2 E9PZ28 E9QL92 Q08874 Q32MU7 Q3U2D2	-
MGP_WSBEiJ_T0077815.1	-	1921	419aa	MGP_WSBEiJ_P0077815	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0077817.1	-	1074	357aa	MGP_WSBEiJ_P0077817	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0077816.1	-	1649	105aa	MGP_WSBEiJ_P0077816	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0077811.1	-	1360	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 1,649 bps, Translation length: 105 residues

Version

MGP_WSBEiJ_T0077816.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0077816.1

Summary

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Transcript: MGP_WSBEiJ_T0077816.1

Summary

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