Transcript: MGP_WSBEiJ_T0074048.1

Description

TSC22 domain family, member 4 [Source:MGI Symbol;Acc:MGI:1926079]

Gene Synonyms

0610009M14Rik, 1700023B23Rik, AI415410, Thg-1pit, Thg1pit, Tilz2

Location

Chromosome 5: 141,333,367-141,343,122 forward strand.

Reference strain equivalent

Tsc22d4

About this transcript

This transcript has 3 exons and maps to 53 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0029419.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0074047.1	-	2730	509aa	MGP_WSBEiJ_P0074047	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19776, CCDS57393	D3YZZ4 D3Z6V5 F6VXN4 Q3U1U6 Q9DA18 Q9EQN3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0074049.1	-	3967	387aa	MGP_WSBEiJ_P0074049	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074053.1	-	1043	149aa	MGP_WSBEiJ_P0074053	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074054.1	-	1043	210aa	MGP_WSBEiJ_P0074054	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074052.1	-	790	168aa	MGP_WSBEiJ_P0074052	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074051.1	-	563	96aa	MGP_WSBEiJ_P0074051	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0074055.1	-	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0074048.1	-	2989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0074050.1	-	402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,989 bps,

Version

MGP_WSBEiJ_T0074048.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0074048.1

Summary

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Transcript: MGP_WSBEiJ_T0074048.1

Summary

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