Transcript: MGP_WSBEiJ_T0056824.1

Description

glycerophosphocholine phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:104898]

Gene Synonyms

2310004G06Rik, 2310032D16Rik, AU015213, Gde5, Kiaa1434, Prei4, mKIAA1434

Location

Chromosome 2: 135,231,949-135,244,902 reverse strand.

Reference strain equivalent

Gpcpd1

About this transcript

This transcript has 7 exons and maps to 198 oligo probes.

Gene

This transcript is a product of gene MGP_WSBEiJ_G0025797.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0056823.1	-	6122	675aa	MGP_WSBEiJ_P0056823	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38246, CCDS71151	A2AMD6 A2AMD7 B0R058 D6RGT7 D6RHB5 D6RHS8 F6YDB7 Q8C0L9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0056829.1	-	678	188aa	MGP_WSBEiJ_P0056829	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0056830.1	-	603	157aa	MGP_WSBEiJ_P0056830	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0056826.1	-	3579	107aa	MGP_WSBEiJ_P0056826	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0056827.1	-	3544	117aa	MGP_WSBEiJ_P0056827	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0056825.1	-	3398	102aa	MGP_WSBEiJ_P0056825	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0056828.1	-	581	26aa	MGP_WSBEiJ_P0056828	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0056831.1	-	427	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0056824.1	-	4356	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 4,356 bps,

Version

MGP_WSBEiJ_T0056824.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_WSBEiJ_T0056824.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_WSBEiJ_T0056824.1

Summary

About Us

Get help

Our sister sites

Follow us