Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: Ush1c MGP_WSBEiJ_G0031413

Description

Usher syndrome 1C [Source:MGI Symbol;Acc:MGI:1919338]

Gene Synonyms

2010016F01Rik, harmonin

Location

WSB_EiJ_v1:CM004060.1

Reference strain equivalent

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0082626.1	-	3072	910aa	MGP_WSBEiJ_P0082626	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0082627.1	-	2767	891aa	MGP_WSBEiJ_P0082627	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0082623.1	-	2291	638aa	MGP_WSBEiJ_P0082623	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21276, CCDS39963, CCDS52250	A0A0R4J0Z8 D6RIM8 E9PYX1 E9QMN1 H3BIZ2 H3BLC4	-
MGP_WSBEiJ_T0082624.1	-	2047	548aa	MGP_WSBEiJ_P0082624	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0082628.1	-	1696	529aa	MGP_WSBEiJ_P0082628	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0082625.1	-	3036	859aa	MGP_WSBEiJ_P0082625	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0082630.1	-	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0082629.1	-	708	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary