Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ccdc9 MGP_WSBEiJ_G0030854

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Description

coiled-coil domain containing 9 [Source:MGI Symbol;Acc:MGI:1921443]

Gene Synonyms

2600011L02Rik

Location

Chromosome 7: 13,879,335-13,895,209 reverse strand.

WSB_EiJ_v1:CM004060.1

Reference strain equivalent

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0080450.1	-	2175	589aa	MGP_WSBEiJ_P0080450	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0080447.1	-	4615	545aa	MGP_WSBEiJ_P0080447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39784, CCDS52039	A0A0G2JDC5 D3YW42 D3Z1Q6 D6RFU6 G3UXR7 G3UXX6 G3UYE3 G3X927	-
MGP_WSBEiJ_T0080451.1	-	2379	544aa	MGP_WSBEiJ_P0080451	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0080458.1	-	630	99aa	MGP_WSBEiJ_P0080458	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0080453.1	-	546	181aa	MGP_WSBEiJ_P0080453	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0080459.1	-	354	21aa	MGP_WSBEiJ_P0080459	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0080461.1	-	283	46aa	MGP_WSBEiJ_P0080461	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0080457.1	-	479	39aa	MGP_WSBEiJ_P0080457	Nonsense mediated decay		-	-
MGP_WSBEiJ_T0080456.1	-	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0080452.1	-	2773	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0080449.1	-	867	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0080455.1	-	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0080454.1	-	394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_WSBEiJ_T0080460.1	-	391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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