Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Tspan9 MGP_WSBEiJ_G0030486

.

Description

tetraspanin 9 [Source:MGI Symbol;Acc:MGI:1924558]

Gene Synonyms

6720474K14Rik, 9430079M16Rik, AU018597, Net5

Location

Chromosome 6: 130,259,919-130,451,836 reverse strand.

WSB_EiJ_v1:CM004059.1

Reference strain equivalent

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_WSBEiJ_T0079053.1	-	4025	330aa	MGP_WSBEiJ_P0079053	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20568	A0A0J9YTS4 A0A0J9YVG5 D3YU98 D3YV18 D3YXN7 D3Z6M6 Q8BJU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_WSBEiJ_T0079055.1	-	748	167aa	MGP_WSBEiJ_P0079055	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0079056.1	-	647	127aa	MGP_WSBEiJ_P0079056	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0079057.1	-	541	125aa	MGP_WSBEiJ_P0079057	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0079059.1	-	388	56aa	MGP_WSBEiJ_P0079059	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0079058.1	-	332	21aa	MGP_WSBEiJ_P0079058	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_WSBEiJ_T0079060.1	-	246	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_WSBEiJ_T0079054.1	-	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

.

Summary

.

.