Transcript: MGP_PWKPhJ_T0063566.1

Description

PDZ and LIM domain 5 [Source:MGI Symbol;Acc:MGI:1927489]

Gene Synonyms

1110001A05Rik, AI987914, C87059, Enh, Enh1, Enh2, Enh3, LIM

Location

Chromosome 3: 139,209,380-139,266,473 reverse strand.

Reference strain equivalent

Pdlim5

About this transcript

This transcript has 6 exons and maps to 32 oligo probes.

Gene

This transcript is a product of gene MGP_PWKPhJ_G0026819.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_PWKPhJ_T0063560.1	-	5067	540aa	MGP_PWKPhJ_P0063560	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PWKPhJ_T0063568.1	-	1847	207aa	MGP_PWKPhJ_P0063568	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063562.1	-	1739	578aa	MGP_PWKPhJ_P0063562	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063563.1	-	1619	538aa	MGP_PWKPhJ_P0063563	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063570.1	-	1592	202aa	MGP_PWKPhJ_P0063570	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063569.1	-	1559	182aa	MGP_PWKPhJ_P0063569	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063561.1	-	1485	494aa	MGP_PWKPhJ_P0063561	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063564.1	-	1417	450aa	MGP_PWKPhJ_P0063564	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063571.1	-	1170	286aa	MGP_PWKPhJ_P0063571	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063567.1	-	749	249aa	MGP_PWKPhJ_P0063567	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063572.1	-	735	207aa	MGP_PWKPhJ_P0063572	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063566.1	-	659	219aa	MGP_PWKPhJ_P0063566	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_PWKPhJ_T0063565.1	-	2079	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_PWKPhJ_T0063559.1	-	5005	571aa	MGP_PWKPhJ_P0063559	Unknown likely coding	CCDS17875, CCDS17876, CCDS38656, CCDS57258, CCDS80035, CCDS80036, CCDS80037, CCDS80038, CCDS80039	A0A0G2JEJ0 A0A0G2JGZ5 D9J2Z9 D9J300 D9J301 D9J302 D9J303 E9Q8P5 F8WJI6 Q8CI51 Q9CRA2	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 659 bps, Translation length: 219 residues

Version

MGP_PWKPhJ_T0063566.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Frameshift introns

Frameshift introns occur at intron number(s) 2.

Transcript: MGP_PWKPhJ_T0063566.1

Summary

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Transcript: MGP_PWKPhJ_T0063566.1

Summary

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