Transcript: MGP_NODShiLtJ_T0072137.1

Description

RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]

Gene Synonyms

2810428M05Rik, 6330416M07Rik, AW455998, AW538594, D5Bwg0860e, Ripx, Rpipx

Location

Chromosome 5: 101,362,893-101,425,979 forward strand.

Reference strain equivalent

Rufy3

About this transcript

This transcript has 14 exons, is annotated with 13 domains and features and maps to 259 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0029511.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_NODShiLtJ_T0072132.1	-	3470	669aa	MGP_NODShiLtJ_P0072132	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_NODShiLtJ_T0072134.1	-	4049	469aa	MGP_NODShiLtJ_P0072134	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0072131.1	-	3703	519aa	MGP_NODShiLtJ_P0072131	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19403, CCDS80323, CCDS80324, CCDS80325	A0A0G2JFT8 Q9D394	-
MGP_NODShiLtJ_T0072133.1	-	2182	487aa	MGP_NODShiLtJ_P0072133	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0072137.1	-	2077	487aa	MGP_NODShiLtJ_P0072137	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_NODShiLtJ_T0072136.1	-	2722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0072135.1	-	2336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_NODShiLtJ_T0072138.1	-	619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,077 bps, Translation length: 487 residues

Version

MGP_NODShiLtJ_T0072137.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_NODShiLtJ_T0072137.1

Summary

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Transcript: MGP_NODShiLtJ_T0072137.1

Summary

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