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Mouse NOD/ShiLtJ (NOD_ShiLtJ_v1) ▼

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Transcript: MGP_NODShiLtJ_T0057539.1

Description

glycerophosphocholine phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:104898]

Gene Synonyms

2310004G06Rik, 2310032D16Rik, AU015213, Gde5, Kiaa1434, Prei4, mKIAA1434

Location

Chromosome 2: 149,278,107-149,330,005 reverse strand.

Reference strain equivalent

Gpcpd1

About this transcript

This transcript has 18 exons and maps to 321 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0026360.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_NODShiLtJ_T0057535.1-3698675aaMGP_NODShiLtJ_P0057535
 
Protein coding
CCDS38246, CCDS71151A2AMD6 A2AMD7 B0R058
D6RGT7 D6RHB5 D6RHS8
F6YDB7 Q8C0L9 		Ensembl Canonical
MGP_NODShiLtJ_T0057541.1-710188aaMGP_NODShiLtJ_P0057541
 
Protein coding
--
MGP_NODShiLtJ_T0057542.1-603157aaMGP_NODShiLtJ_P0057542
 
Protein coding
--
MGP_NODShiLtJ_T0057537.1-3612107aaMGP_NODShiLtJ_P0057537
 
Nonsense mediated decay
--
MGP_NODShiLtJ_T0057538.1-3577117aaMGP_NODShiLtJ_P0057538
 
Nonsense mediated decay
--
MGP_NODShiLtJ_T0057539.1-3431102aaMGP_NODShiLtJ_P0057539
 
Nonsense mediated decay
--
MGP_NODShiLtJ_T0057540.1-58126aaMGP_NODShiLtJ_P0057540
 
Nonsense mediated decay
--
MGP_NODShiLtJ_T0057543.1-459No protein-
 
Processed transcript
--
MGP_NODShiLtJ_T0057544.1-334No protein-
 
Processed transcript
--
MGP_NODShiLtJ_T0057536.1-4356No protein-
 
Retained intron
--

Summary

Statistics

Exons: 18, Coding exons: 5, Transcript length: 3,431 bps, Translation length: 102 residues

Version

MGP_NODShiLtJ_T0057539.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.