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Mouse NOD/ShiLtJ (NOD_ShiLtJ_v1) ▼

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Transcript: MGP_NODShiLtJ_T0030576.1

Description

active BCR-related gene [Source:MGI Symbol;Acc:MGI:107771]

Gene Synonyms

6330400K15Rik

Location

Chromosome 11: 83,651,461-83,750,320 reverse strand.

Reference strain equivalent

Abr

About this transcript

This transcript has 22 exons, is annotated with 34 domains and features and maps to 281 oligo probes.

Gene

This transcript is a product of gene MGP_NODShiLtJ_G0018583.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_NODShiLtJ_T0030576.1-5236871aaMGP_NODShiLtJ_P0030576
 
Protein coding
CCDS25066, CCDS25067, CCDS36231, CCDS70246E9PUE7 H3BJY3 H3BKT3
H3BKV6 H3BL84 Q5SSL4
Z4YN68 		Ensembl Canonical
MGP_NODShiLtJ_T0030577.1-5405859aaMGP_NODShiLtJ_P0030577
 
Protein coding
--
MGP_NODShiLtJ_T0030578.1-4811813aaMGP_NODShiLtJ_P0030578
 
Protein coding
--
MGP_NODShiLtJ_T0030579.1-4444641aaMGP_NODShiLtJ_P0030579
 
Protein coding
--
MGP_NODShiLtJ_T0030580.1-3527822aaMGP_NODShiLtJ_P0030580
 
Protein coding
--
MGP_NODShiLtJ_T0030584.1-784161aaMGP_NODShiLtJ_P0030584
 
Protein coding
--
MGP_NODShiLtJ_T0030585.1-682128aaMGP_NODShiLtJ_P0030585
 
Protein coding
--
MGP_NODShiLtJ_T0030586.1-546110aaMGP_NODShiLtJ_P0030586
 
Protein coding
--
MGP_NODShiLtJ_T0030587.1-41091aaMGP_NODShiLtJ_P0030587
 
Protein coding
--
MGP_NODShiLtJ_T0030582.1-803145aaMGP_NODShiLtJ_P0030582
 
Nonsense mediated decay
--
MGP_NODShiLtJ_T0030588.1-2009No protein-
 
Processed transcript
--
MGP_NODShiLtJ_T0030581.1-717No protein-
 
Processed transcript
--
MGP_NODShiLtJ_T0030583.1-2392No protein-
 
Retained intron
--

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 5,236 bps, Translation length: 871 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5SSL4

CCDS

This transcript is a member of the Mouse NOD/ShiLtJ CCDS set: CCDS25066, CCDS25067, CCDS36231, CCDS70246

Version

MGP_NODShiLtJ_T0030576.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.