Transcript: MGP_LPJ_T0092663.1

Description

ubiquitin specific peptidase 3 [Source:MGI Symbol;Acc:MGI:2152450]

Gene Synonyms

AA409661, BC017156

Location

Chromosome 9: 66,610,225-66,691,643 reverse strand.

Reference strain equivalent

Usp3

About this transcript

This transcript has 14 exons, is annotated with 17 domains and features and maps to 378 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0034873.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0092661.1	-	5589	520aa	MGP_LPJ_P0092661	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23305, CCDS81025	D6RG67 E9Q8W9 G3UZF0 Q91W36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0092663.1	-	2797	482aa	MGP_LPJ_P0092663	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0092665.1	-	1901	476aa	MGP_LPJ_P0092665	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0092662.1	-	3662	49aa	MGP_LPJ_P0092662	Nonsense mediated decay		-	-
MGP_LPJ_T0092669.1	-	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0092671.1	-	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0092664.1	-	2405	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0092670.1	-	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0092668.1	-	625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0092666.1	-	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0092667.1	-	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,797 bps, Translation length: 482 residues

Version

MGP_LPJ_T0092663.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0092663.1

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Transcript: MGP_LPJ_T0092663.1

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