Transcript: MGP_LPJ_T0089146.1

Description

FCH domain only 1 [Source:MGI Symbol;Acc:MGI:1921265]

Gene Synonyms

3322402E17Rik, N28152

Location

Chromosome 8: 72,114,261-72,117,262 reverse strand.

Reference strain equivalent

Fcho1

About this transcript

This transcript has 9 exons and maps to 60 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0033671.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0089141.1	-	3188	873aa	MGP_LPJ_P0089141	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0089140.1	-	3073	873aa	MGP_LPJ_P0089140	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52588	D3YYE9 D3Z6N2 D6RCG0 F6VQ30 Q8K285	-
MGP_LPJ_T0089148.1	-	746	203aa	MGP_LPJ_P0089148	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0089151.1	-	443	87aa	MGP_LPJ_P0089151	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0089143.1	-	2966	304aa	MGP_LPJ_P0089143	Nonsense mediated decay		-	-
MGP_LPJ_T0089146.1	-	682	83aa	MGP_LPJ_P0089146	Nonsense mediated decay		-	-
MGP_LPJ_T0089149.1	-	732	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0089142.1	-	3351	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0089145.1	-	1027	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0089147.1	-	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0089150.1	-	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0089144.1	-	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 682 bps, Translation length: 83 residues

Version

MGP_LPJ_T0089146.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0089146.1

Summary

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Transcript: MGP_LPJ_T0089146.1

Summary

About Us

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