Transcript: MGP_LPJ_T0088143.1

Description

ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]

Gene Synonyms

Ank-1, nb, pale

Location

Chromosome 8: 20,849,012-21,041,285 forward strand.

Reference strain equivalent

Ank1

About this transcript

This transcript has 44 exons, is annotated with 111 domains and features and maps to 327 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0033370.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0088143.1	-	8217	1907aa	MGP_LPJ_P0088143	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0088150.1	-	8200	1878aa	MGP_LPJ_P0088150	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088149.1	-	8146	1848aa	MGP_LPJ_P0088149	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088142.1	-	7206	1744aa	MGP_LPJ_P0088142	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22187, CCDS52523, CCDS72099, CCDS72100, CCDS72101, CCDS72102, CCDS72103, CCDS80864, CCDS80865	A0A0R4J1N7 B7ZW98 D3YTV8 D3Z5M4 D6RJ51 E9QNT8 F7D1P5 G3UXF4 G3UY11 G5E8J2 G8JL84 Q02357 Q0VGY9	-
MGP_LPJ_T0088152.1	-	7100	1852aa	MGP_LPJ_P0088152	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088146.1	-	6794	1887aa	MGP_LPJ_P0088146	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088147.1	-	6566	1863aa	MGP_LPJ_P0088147	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088145.1	-	6257	1862aa	MGP_LPJ_P0088145	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088144.1	-	5652	1883aa	MGP_LPJ_P0088144	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088153.1	-	3522	1098aa	MGP_LPJ_P0088153	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088155.1	-	1740	155aa	MGP_LPJ_P0088155	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088156.1	-	1030	156aa	MGP_LPJ_P0088156	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088157.1	-	328	109aa	MGP_LPJ_P0088157	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0088148.1	-	8365	572aa	MGP_LPJ_P0088148	Nonsense mediated decay		-	-
MGP_LPJ_T0088151.1	-	5781	1057aa	MGP_LPJ_P0088151	Nonsense mediated decay		-	-
MGP_LPJ_T0088154.1	-	4300	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0088158.1	-	416	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 44, Coding exons: 43, Transcript length: 8,217 bps, Translation length: 1,907 residues

Version

MGP_LPJ_T0088143.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0088143.1

Summary

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Transcript: MGP_LPJ_T0088143.1

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