Transcript: MGP_LPJ_T0049042.1

Description

adenomatosis polyposis coli [Source:MGI Symbol;Acc:MGI:88039]

Gene Synonyms

AI047805, AU020952, AW124434, CC1, Min, mAPC

Location

Chromosome 18: 32,584,366-32,598,685 forward strand.

Reference strain equivalent

Apc

About this transcript

This transcript has 3 exons and maps to 65 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0024151.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0049036.1	-	8867	2842aa	MGP_LPJ_P0049036	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0049037.1	-	12345	2808aa	MGP_LPJ_P0049037	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0049035.1	-	3588	1133aa	MGP_LPJ_P0049035	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29125	B2RUG9 E9Q4H1 E9QLQ9 F6Q4R2 F6Z405 Q8C493	-
MGP_LPJ_T0049041.1	-	1185	324aa	MGP_LPJ_P0049041	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0049042.1	-	2633	50aa	MGP_LPJ_P0049042	Nonsense mediated decay		-	-
MGP_LPJ_T0049039.1	-	608	20aa	MGP_LPJ_P0049039	Nonsense mediated decay		-	-
MGP_LPJ_T0049043.1	-	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0049040.1	-	2732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_LPJ_T0049038.1	-	1825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,633 bps, Translation length: 50 residues

Version

MGP_LPJ_T0049042.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0049042.1

Summary

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Transcript: MGP_LPJ_T0049042.1

Summary

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