Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: MGP_LPJ_T0047008.1

Description

activating transcription factor 6 beta [Source:MGI Symbol;Acc:MGI:105121]

Gene Synonyms

AA617266, ATF6beta, Creb-rp, Crebl1

Location

Chromosome 17: 35,000,971-35,002,972 forward strand.

Reference strain equivalent

Atf6b

About this transcript

This transcript has 4 exons and maps to 33 oligo probes.

Gene

This transcript is a product of gene MGP_LPJ_G0023496.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0047009.1	-	2315	709aa	MGP_LPJ_P0047009	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0047006.1	-	2566	706aa	MGP_LPJ_P0047006	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28655	A0A0A0MQ69 G3UX19 G3UX56 G3UXQ6	-
MGP_LPJ_T0047007.1	-	386	72aa	MGP_LPJ_P0047007	Nonsense mediated decay		-	-
MGP_LPJ_T0047008.1	-	372	35aa	MGP_LPJ_P0047008	Nonsense mediated decay		-	-
MGP_LPJ_T0047010.1	-	395	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 372 bps, Translation length: 35 residues

Version

MGP_LPJ_T0047008.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_LPJ_T0047008.1

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Transcript: MGP_LPJ_T0047008.1

Summary

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