Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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ID History
- Gene history

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Gene: Hpd MGP_LPJ_G0029969

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Description

4-hydroxyphenylpyruvic acid dioxygenase [Source:MGI Symbol;Acc:MGI:96213]

Gene Synonyms

Fla, Flp, Hppd, Laf

Location

Chromosome 5: 127,395,678-127,406,584 reverse strand.

LP_J_v1:CM004260.1

Reference strain equivalent

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0074047.1	-	1404	393aa	MGP_LPJ_P0074047	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39265	D3Z1U3 F6X9Z6 P49429	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0074051.1	-	744	159aa	MGP_LPJ_P0074051	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0074049.1	-	334	95aa	MGP_LPJ_P0074049	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0074048.1	-	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0074052.1	-	326	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0074050.1	-	975	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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