Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lrsam1 MGP_LPJ_G0025558

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Description

leucine rich repeat and sterile alpha motif containing 1 [Source:MGI Symbol;Acc:MGI:2684789]

Location

Chromosome 2: 31,307,169-31,347,894 reverse strand.

LP_J_v1:CM004257.1

Reference strain equivalent

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_LPJ_T0054088.1	-	3781	727aa	MGP_LPJ_P0054088	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_LPJ_T0054087.1	-	3732	727aa	MGP_LPJ_P0054087	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15935	A0A0A6YWS5 A0A0A6YWV2 A2AHX2 A2AHX3 A2AHX4 A2AHX5 A2AHX6 Q80ZI6	-
MGP_LPJ_T0054091.1	-	770	129aa	MGP_LPJ_P0054091	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0054092.1	-	668	128aa	MGP_LPJ_P0054092	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0054096.1	-	458	55aa	MGP_LPJ_P0054096	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0054093.1	-	452	124aa	MGP_LPJ_P0054093	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0054095.1	-	358	58aa	MGP_LPJ_P0054095	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_LPJ_T0054089.1	-	686	42aa	MGP_LPJ_P0054089	Nonsense mediated decay		-	-
MGP_LPJ_T0054094.1	-	587	84aa	MGP_LPJ_P0054094	Nonsense mediated decay		-	-
MGP_LPJ_T0054098.1	-	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0054097.1	-	376	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_LPJ_T0054090.1	-	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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