Transcript: MGP_FVBNJ_T0092432.1

Description

PIF1 5'-to-3' DNA helicase [Source:MGI Symbol;Acc:MGI:2143057]

Gene Synonyms

4631410M14, AI449441

Location

Chromosome 9: 62,221,563-62,231,503 forward strand.

Reference strain equivalent

Pif1

About this transcript

This transcript has 12 exons and maps to 166 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0034718.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0092434.1	-	3696	650aa	MGP_FVBNJ_P0092434	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0092430.1	-	3406	650aa	MGP_FVBNJ_P0092430	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23295	D3YZ87 D6RFC6 Q80SX8	-
MGP_FVBNJ_T0092436.1	-	3321	650aa	MGP_FVBNJ_P0092436	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0092437.1	-	756	157aa	MGP_FVBNJ_P0092437	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0092431.1	-	384	9aa	MGP_FVBNJ_P0092431	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0092432.1	-	3736	411aa	MGP_FVBNJ_P0092432	Nonsense mediated decay		-	-
MGP_FVBNJ_T0092435.1	-	3908	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0092433.1	-	2467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 7, Transcript length: 3,736 bps, Translation length: 411 residues

Version

MGP_FVBNJ_T0092432.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0092432.1

Summary

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Transcript: MGP_FVBNJ_T0092432.1

Summary

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