Transcript: MGP_FVBNJ_T0088515.1

Description

palladin, cytoskeletal associated protein [Source:MGI Symbol;Acc:MGI:1919583]

Gene Synonyms

2410003B16Rik, 6030492A02, Kiaa0992

Location

Chromosome 8: 57,873,890-58,266,632 reverse strand.

Reference strain equivalent

Palld

About this transcript

This transcript has 22 exons, is annotated with 51 domains and features and maps to 253 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0033397.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0088515.1	-	4536	1408aa	MGP_FVBNJ_P0088515	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40350, CCDS80880, CCDS80881, CCDS80882	D3Z1J5 Q9ET54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0088516.1	-	3626	1002aa	MGP_FVBNJ_P0088516	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0088519.1	-	3566	1113aa	MGP_FVBNJ_P0088519	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0088517.1	-	2550	849aa	MGP_FVBNJ_P0088517	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0088520.1	-	1325	336aa	MGP_FVBNJ_P0088520	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0088522.1	-	2570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0088523.1	-	2485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0088521.1	-	679	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0088518.1	-	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 4,536 bps, Translation length: 1,408 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ET54

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS40350, CCDS80880, CCDS80881, CCDS80882

Version

MGP_FVBNJ_T0088515.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0088515.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_FVBNJ_T0088515.1

Summary

About Us

Get help

Our sister sites

Follow us