Transcript: MGP_FVBNJ_T0070746.1

Description

Wolf-Hirschhorn syndrome candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1276574]

Gene Synonyms

5830445G22Rik, 9430010A17Rik, AW555663, C130020C13Rik, D030027O06Rik, D930023B08Rik, Kiaa1090, MMSET, NSD2, Nsd2, Whsc1l, mKIAA1090

Location

Chromosome 5: 30,645,121-30,661,362 forward strand.

Reference strain equivalent

Nsd2

About this transcript

This transcript has 13 exons and maps to 210 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0029228.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0070735.1	-	7142	1366aa	MGP_FVBNJ_P0070735	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51467, CCDS51468	A0A0J9YUM7 D3Z229 D3Z3E0 D3Z3E4 F6S6G6 F6Y765 Q8BVE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0070739.1	-	7786	647aa	MGP_FVBNJ_P0070739	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0070741.1	-	6919	1366aa	MGP_FVBNJ_P0070741	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0070744.1	-	6323	166aa	MGP_FVBNJ_P0070744	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0070736.1	-	5738	629aa	MGP_FVBNJ_P0070736	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0070742.1	-	4633	1365aa	MGP_FVBNJ_P0070742	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0070737.1	-	753	225aa	MGP_FVBNJ_P0070737	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0070738.1	-	7153	647aa	MGP_FVBNJ_P0070738	Nonsense mediated decay		-	-
MGP_FVBNJ_T0070740.1	-	7020	647aa	MGP_FVBNJ_P0070740	Nonsense mediated decay		-	-
MGP_FVBNJ_T0070743.1	-	4473	533aa	MGP_FVBNJ_P0070743	Nonsense mediated decay		-	-
MGP_FVBNJ_T0070746.1	-	2269	272aa	MGP_FVBNJ_P0070746	Nonsense mediated decay		-	-
MGP_FVBNJ_T0070745.1	-	1004	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0070748.1	-	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0070749.1	-	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0070747.1	-	454	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 13, Coding exons: 7, Transcript length: 2,269 bps, Translation length: 272 residues

Version

MGP_FVBNJ_T0070746.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0070746.1

Summary

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Transcript: MGP_FVBNJ_T0070746.1

Summary

About Us

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