Transcript: MGP_FVBNJ_T0062558.1

Description

tripartite motif-containing 33 [Source:MGI Symbol;Acc:MGI:2137357]

Gene Synonyms

8030451N04Rik, AI413936, Ecto, Tif1g, ectodermin

Location

Chromosome 3: 98,445,778-98,473,664 forward strand.

Reference strain equivalent

Trim33

About this transcript

This transcript has 13 exons and maps to 154 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0027480.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0062553.1	-	8867	1142aa	MGP_FVBNJ_P0062553	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38573, CCDS38574	A0A0G2JE09 A0A0G2JFC3 A0A0G2JGY5 E9QME5 E9QP19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0062554.1	-	4824	1125aa	MGP_FVBNJ_P0062554	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0062559.1	-	2945	347aa	MGP_FVBNJ_P0062559	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0062555.1	-	577	192aa	MGP_FVBNJ_P0062555	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0062558.1	-	1788	402aa	MGP_FVBNJ_P0062558	Nonsense mediated decay		-	-
MGP_FVBNJ_T0062557.1	-	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0062556.1	-	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 13, Coding exons: 9, Transcript length: 1,788 bps, Translation length: 402 residues

Version

MGP_FVBNJ_T0062558.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0062558.1

Summary

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Transcript: MGP_FVBNJ_T0062558.1

Summary

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