Transcript: MGP_FVBNJ_T0060522.1

Description

suppressor of Ty 20 [Source:MGI Symbol;Acc:MGI:1929651]

Gene Synonyms

AA667204, AI450544, D3Ertd300e, Fam48a, Supt20h, p38 interacting protein, p38IP

Location

Chromosome 3: 50,279,880-50,315,712 forward strand.

Reference strain equivalent

Supt20

About this transcript

This transcript has 27 exons, is annotated with 24 domains and features and maps to 322 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0027006.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0060522.1	-	2751	784aa	MGP_FVBNJ_P0060522	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38431	A0A0G2JE63 A0A0G2JEY3 A0A0G2JFM5 A0A0G2JGD1 A0A0G2JGY6 Q7TT00 Z4YJG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0060524.1	-	2154	275aa	MGP_FVBNJ_P0060524	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0060523.1	-	2112	263aa	MGP_FVBNJ_P0060523	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0060531.1	-	1968	531aa	MGP_FVBNJ_P0060531	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0060526.1	-	836	141aa	MGP_FVBNJ_P0060526	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0060530.1	-	682	181aa	MGP_FVBNJ_P0060530	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0060532.1	-	3753	530aa	MGP_FVBNJ_P0060532	Nonsense mediated decay		-	-
MGP_FVBNJ_T0060525.1	-	3700	529aa	MGP_FVBNJ_P0060525	Nonsense mediated decay		-	-
MGP_FVBNJ_T0060527.1	-	1866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0060529.1	-	1341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0060533.1	-	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0060528.1	-	364	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 27, Coding exons: 25, Transcript length: 2,751 bps, Translation length: 784 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7TT00

CCDS

This transcript is a member of the Mouse FVB/NJ CCDS set: CCDS38431

Version

MGP_FVBNJ_T0060522.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0060522.1

Summary

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Transcript: MGP_FVBNJ_T0060522.1

Summary

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