Mouse FVB/NJ (FVB_NJ_v1)
Description

intersectin 1 (SH3 domain protein 1A) [Source:MGI Symbol;Acc:MGI:1338069]

Gene Synonyms

AA517634, AA545208, AI316805, AI839402, AI848451, EHSH1, Eh domain, SH3 domain regulator of endocytosis 1, Ehsh1, Ese1, Intersectin-L, Itsn, Sh3p17

Location
Reference strain equivalent
About this transcript

This transcript has 3 exons and maps to 29 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_FVBNJ_T0044866.1-74141719aaMGP_FVBNJ_P0044866
 
Protein coding
-Ensembl Canonical
MGP_FVBNJ_T0044867.1-139511714aaMGP_FVBNJ_P0044867
 
Protein coding
--
MGP_FVBNJ_T0044868.1-6095621aaMGP_FVBNJ_P0044868
 
Protein coding
--
MGP_FVBNJ_T0044865.1-53931218aaMGP_FVBNJ_P0044865
 
Protein coding
--
MGP_FVBNJ_T0044869.1-53641213aaMGP_FVBNJ_P0044869
 
Protein coding
--
MGP_FVBNJ_T0044870.1-51471142aaMGP_FVBNJ_P0044870
 
Protein coding
--
MGP_FVBNJ_T0044864.1-38981176aaMGP_FVBNJ_P0044864
 
Protein coding
CCDS37402, CCDS49913, CCDS49914D3Z6P4 E9Q0N0 E9Q3I4
E9Q3I5 E9Q3I8 E9Q3I9
F6R6C8 F6TCC6 F6U8U1
F6ZLP6 F6ZX53 Q6J1S9
Q6NZJ5 Q9Z0R4
-
MGP_FVBNJ_T0044873.1-37871147aaMGP_FVBNJ_P0044873
 
Protein coding
--
MGP_FVBNJ_T0044874.1-1110359aaMGP_FVBNJ_P0044874
 
Protein coding
--
MGP_FVBNJ_T0044886.1-1036345aaMGP_FVBNJ_P0044886
 
Protein coding
--
MGP_FVBNJ_T0044882.1-821256aaMGP_FVBNJ_P0044882
 
Protein coding
--
MGP_FVBNJ_T0044888.1-519173aaMGP_FVBNJ_P0044888
 
Protein coding
--
MGP_FVBNJ_T0044881.1-99177aaMGP_FVBNJ_P0044881
 
Nonsense mediated decay
--
MGP_FVBNJ_T0044887.1-42265aaMGP_FVBNJ_P0044887
 
Nonsense mediated decay
--
MGP_FVBNJ_T0044883.1-28272aaMGP_FVBNJ_P0044883
 
Nonsense mediated decay
--
MGP_FVBNJ_T0044889.1-1055No protein-
 
Processed transcript
--
MGP_FVBNJ_T0044878.1-723No protein-
 
Processed transcript
--
MGP_FVBNJ_T0044885.1-568No protein-
 
Processed transcript
--
MGP_FVBNJ_T0044875.1-481No protein-
 
Processed transcript
--
MGP_FVBNJ_T0044876.1-442No protein-
 
Processed transcript
--
MGP_FVBNJ_T0044884.1-2815No protein-
 
Retained intron
--
MGP_FVBNJ_T0044880.1-777No protein-
 
Retained intron
--
MGP_FVBNJ_T0044879.1-492No protein-
 
Retained intron
--
MGP_FVBNJ_T0044872.1-488No protein-
 
Retained intron
--
MGP_FVBNJ_T0044877.1-355No protein-
 
Retained intron
--
MGP_FVBNJ_T0044871.1-352No protein-
 
Retained intron
--
Statistics

Exons: 3, Coding exons: 0, Transcript length: 355 bps,

Version

MGP_FVBNJ_T0044877.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.