Transcript: MGP_FVBNJ_T0044784.1

Description

synaptojanin 1 [Source:MGI Symbol;Acc:MGI:1354961]

Gene Synonyms

A930006D20Rik, AA675315, mKIAA0910

Location

Chromosome 16: 86,680,145-86,730,363 reverse strand.

Reference strain equivalent

Synj1

About this transcript

This transcript has 19 exons and maps to 181 oligo probes.

Gene

This transcript is a product of gene MGP_FVBNJ_G0022840.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0044777.1	-	7083	1607aa	MGP_FVBNJ_P0044777	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49906, CCDS49907	D3Z1M7 D3Z656 E9Q7S0 F6VSS8 F6XIX0 F7BQW7 F7CD11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0044778.1	-	7008	1309aa	MGP_FVBNJ_P0044778	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044780.1	-	4771	1323aa	MGP_FVBNJ_P0044780	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044779.1	-	3493	188aa	MGP_FVBNJ_P0044779	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044785.1	-	2189	693aa	MGP_FVBNJ_P0044785	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044782.1	-	547	103aa	MGP_FVBNJ_P0044782	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044783.1	-	354	117aa	MGP_FVBNJ_P0044783	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_FVBNJ_T0044781.1	-	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0044784.1	-	2743	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0044786.1	-	947	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 19, Coding exons: 0, Transcript length: 2,743 bps,

Version

MGP_FVBNJ_T0044784.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_FVBNJ_T0044784.1

Summary

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Transcript: MGP_FVBNJ_T0044784.1

Summary

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