Description
nischarin [Source:MGI Symbol;Acc:MGI:1928323]
Gene Synonyms
1200007D05Rik, 3202002H23Rik, AW494485, I-1, Kiaa0975
Location
Chromosome 14: 23,447,408-23,452,243 reverse strand.
Reference strain equivalent
About this transcript
This transcript has 3 exons, is annotated with 8 domains and features and maps to 77 oligo probes.
Gene
This transcript is a product of gene MGP_FVBNJ_G0020929.1 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| MGP_FVBNJ_T0038499.1 | - | 5559 | 1593aa | MGP_FVBNJ_P0038499 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS36853 | E9PZT1 F6PY46 F6UKP3 F6YR29 F6ZL22 F6ZL69 F7AFP3 F7AN84 F7AVB2 Q80TM9 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_FVBNJ_T0038500.1 | - | 4990 | 1348aa | MGP_FVBNJ_P0038500 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038511.1 | - | 2780 | 516aa | MGP_FVBNJ_P0038511 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038514.1 | - | 2415 | 472aa | MGP_FVBNJ_P0038514 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038520.1 | - | 1763 | 153aa | MGP_FVBNJ_P0038520 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038506.1 | - | 1206 | 226aa | MGP_FVBNJ_P0038506 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038502.1 | - | 1204 | 333aa | MGP_FVBNJ_P0038502 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038503.1 | - | 856 | 166aa | MGP_FVBNJ_P0038503 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038513.1 | - | 747 | 248aa | MGP_FVBNJ_P0038513 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038504.1 | - | 725 | 241aa | MGP_FVBNJ_P0038504 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038505.1 | - | 689 | 229aa | MGP_FVBNJ_P0038505 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038501.1 | - | 589 | 148aa | MGP_FVBNJ_P0038501 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | |
| MGP_FVBNJ_T0038515.1 | - | 2276 | 334aa | MGP_FVBNJ_P0038515 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0038507.1 | - | 761 | 44aa | MGP_FVBNJ_P0038507 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0038517.1 | - | 683 | 57aa | MGP_FVBNJ_P0038517 | Nonsense mediated decay | - | - | |
| MGP_FVBNJ_T0038519.1 | - | 3716 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0038516.1 | - | 918 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0038508.1 | - | 736 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0038509.1 | - | 632 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0038521.1 | - | 493 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0038510.1 | - | 431 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0038512.1 | - | 389 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | |
| MGP_FVBNJ_T0038518.1 | - | 645 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - |