Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Copa MGP_FVBNJ_G0016619

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Description

coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]

Gene Synonyms

AU040324, xenin

Location

Chromosome 1: 167,841,619-167,880,828 forward strand.

FVB_NJ_v1:CM004074.1

Reference strain equivalent

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_FVBNJ_T0023372.1	-	4351	1233aa	MGP_FVBNJ_P0023372	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_FVBNJ_T0023368.1	-	4622	1224aa	MGP_FVBNJ_P0023368	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35780	D6RH55 F6XJN3 F8WHL2 Q8CIE6	-
MGP_FVBNJ_T0023370.1	-	1627	78aa	MGP_FVBNJ_P0023370	Nonsense mediated decay		-	-
MGP_FVBNJ_T0023374.1	-	657	142aa	MGP_FVBNJ_P0023374	Nonsense mediated decay		-	-
MGP_FVBNJ_T0023373.1	-	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_FVBNJ_T0023369.1	-	2970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0023376.1	-	2584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0023371.1	-	2532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0023375.1	-	2507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_FVBNJ_T0023377.1	-	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

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Summary

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