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Transcript: MGP_DBA2J_T0063779.1

Description

PDZ and LIM domain 5 [Source:MGI Symbol;Acc:MGI:1927489]

Gene Synonyms

1110001A05Rik, AI987914, C87059, Enh, Enh1, Enh2, Enh3, LIM

Location

Chromosome 3: 139,397,966-139,560,629 reverse strand.

Reference strain equivalent

Pdlim5

About this transcript

This transcript has 13 exons, is annotated with 43 domains and features and maps to 421 oligo probes.

Gene

This transcript is a product of gene MGP_DBA2J_G0027755.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_DBA2J_T0063782.1-1845614aaMGP_DBA2J_P0063782
 
Protein coding
-Ensembl Canonical
MGP_DBA2J_T0063779.1-5014591aaMGP_DBA2J_P0063779
 
Protein coding
CCDS17875, CCDS17876, CCDS38656, CCDS57258, CCDS80035, CCDS80036, CCDS80037, CCDS80038, CCDS80039A0A0G2JEJ0 A0A0G2JGZ5 D9J2Z9
D9J300 D9J301 D9J302
D9J303 E9Q8P5 F8WJI6
Q8CI51 Q9CRA2 		-
MGP_DBA2J_T0063787.1-2010239aaMGP_DBA2J_P0063787
 
Protein coding
--
MGP_DBA2J_T0063789.1-1755234aaMGP_DBA2J_P0063789
 
Protein coding
--
MGP_DBA2J_T0063783.1-1725574aaMGP_DBA2J_P0063783
 
Protein coding
--
MGP_DBA2J_T0063788.1-1722214aaMGP_DBA2J_P0063788
 
Protein coding
--
MGP_DBA2J_T0063781.1-1581526aaMGP_DBA2J_P0063781
 
Protein coding
--
MGP_DBA2J_T0063780.1-1555482aaMGP_DBA2J_P0063780
 
Protein coding
--
MGP_DBA2J_T0063790.1-1196337aaMGP_DBA2J_P0063790
 
Protein coding
--
MGP_DBA2J_T0063791.1-873239aaMGP_DBA2J_P0063791
 
Protein coding
--
MGP_DBA2J_T0063786.1-759252aaMGP_DBA2J_P0063786
 
Protein coding
--
MGP_DBA2J_T0063785.1-669222aaMGP_DBA2J_P0063785
 
Protein coding
--
MGP_DBA2J_T0063784.1-2002No protein-
 
Retained intron
--

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 5,014 bps, Translation length: 591 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CI51

CCDS

This transcript is a member of the Mouse DBA/2J CCDS set: CCDS17875, CCDS17876, CCDS38656, CCDS57258, CCDS80035, CCDS80036, CCDS80037, CCDS80038, CCDS80039

Version

MGP_DBA2J_T0063779.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.