Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Bdnf MGP_CBAJ_G0025938

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Description

brain derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:88145]

Location

Chromosome 2: 119,682,136-119,733,922 forward strand.

CBA_J_v1:CM004015.1

Reference strain equivalent

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CBAJ_T0056237.1	-	3901	289aa	MGP_CBAJ_P0056237	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CBAJ_T0056227.1	-	4262	257aa	MGP_CBAJ_P0056227	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38193, CCDS38194	A2AII2 H9H9S8 P21237 Q541P3	-
MGP_CBAJ_T0056228.1	-	4121	249aa	MGP_CBAJ_P0056228	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056229.1	-	4038	249aa	MGP_CBAJ_P0056229	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056234.1	-	3969	249aa	MGP_CBAJ_P0056234	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056232.1	-	3961	249aa	MGP_CBAJ_P0056232	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056236.1	-	3850	249aa	MGP_CBAJ_P0056236	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056235.1	-	3835	249aa	MGP_CBAJ_P0056235	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056230.1	-	3826	249aa	MGP_CBAJ_P0056230	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056231.1	-	3815	249aa	MGP_CBAJ_P0056231	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CBAJ_T0056233.1	-	3703	249aa	MGP_CBAJ_P0056233	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-

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Summary

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