Transcript: MGP_CASTEiJ_T0095753.1

Description

suppressor of variegation 3-9 homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:1099440]

Gene Synonyms

AI852103, AL022883, DXHXS7466e, H3-K9-HMTase 1, KMT1A, Suv39h, Suv39h histone methyltransferase, mIS6

Location

Chromosome X: 2,644,337-2,657,947 reverse strand.

Reference strain equivalent

Suv39h1

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features and maps to 192 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0034521.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0095755.1	-	2778	413aa	MGP_CASTEiJ_P0095755	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0095753.1	-	3116	412aa	MGP_CASTEiJ_P0095753	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40846, CCDS72337	A2AC19 O54864	-
MGP_CASTEiJ_T0095756.1	-	2715	286aa	MGP_CASTEiJ_P0095756	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0095754.1	-	2807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0095757.1	-	1166	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,116 bps, Translation length: 412 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O54864

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS40846, CCDS72337

Version

MGP_CASTEiJ_T0095753.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CASTEiJ_T0095753.1

Summary

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Transcript: MGP_CASTEiJ_T0095753.1

Summary

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