Ensembl mirror
More ▼
Search »
Mouse CAST/EiJ (CAST_EiJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_CASTEiJ_T0084324.1

Description

SNRPN upstream reading frame [Source:MGI Symbol;Acc:MGI:1891236]

Gene Synonyms

2410045I01Rik, Snrpn

Location

Chromosome 7: 52,288,251-52,323,664 reverse strand.

Reference strain equivalent

Gm38393

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features and maps to 128 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0031356.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0084325.1-120271aaMGP_CASTEiJ_P0084325
 
Nonsense mediated decay
-Ensembl Canonical
MGP_CASTEiJ_T0084324.1-53938aaMGP_CASTEiJ_P0084324
 
Nonsense mediated decay
CCDS57553Q9WU12 -
MGP_CASTEiJ_T0084326.1-3926No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0084327.1-333No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 539 bps, Translation length: 38 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WU12

CCDS

This transcript is a member of the Mouse CAST/EiJ CCDS set: CCDS57553

Version

MGP_CASTEiJ_T0084324.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.