Mouse CAST/EiJ (CAST_EiJ_v1)
Description

C2 calcium-dependent domain containing 5 [Source:MGI Symbol;Acc:MGI:1921991]

Gene Synonyms

5730419I09Rik, C030008B15Rik, CDP138, Cdp138, Kiaa0528

Reference strain equivalent
About this transcript

This transcript has 28 exons, is annotated with 12 domains and features and maps to 232 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_CASTEiJ_T0081083.1-33321052aaMGP_CASTEiJ_P0081083
 
Protein coding
-Ensembl Canonical
MGP_CASTEiJ_T0081076.1-4292999aaMGP_CASTEiJ_P0081076
 
Protein coding
--
MGP_CASTEiJ_T0081075.1-4265990aaMGP_CASTEiJ_P0081075
 
Protein coding
CCDS51951, CCDS51952, CCDS51953A0A0N4SVN0 A0A0N4SW58 A0A0N4SW69
A0A0N4SW93 E9Q026 Q7TPS5
-
MGP_CASTEiJ_T0081078.1-4062990aaMGP_CASTEiJ_P0081078
 
Protein coding
--
MGP_CASTEiJ_T0081079.1-3526999aaMGP_CASTEiJ_P0081079
 
Protein coding
--
MGP_CASTEiJ_T0081081.1-34941016aaMGP_CASTEiJ_P0081081
 
Protein coding
--
MGP_CASTEiJ_T0081091.1-771232aaMGP_CASTEiJ_P0081091
 
Protein coding
--
MGP_CASTEiJ_T0081086.1-543181aaMGP_CASTEiJ_P0081086
 
Protein coding
--
MGP_CASTEiJ_T0081077.1-414970aaMGP_CASTEiJ_P0081077
 
Nonsense mediated decay
--
MGP_CASTEiJ_T0081089.1-685No protein-
 
Processed transcript
--
MGP_CASTEiJ_T0081085.1-4584No protein-
 
Retained intron
--
MGP_CASTEiJ_T0081088.1-3122No protein-
 
Retained intron
--
MGP_CASTEiJ_T0081084.1-2993No protein-
 
Retained intron
--
MGP_CASTEiJ_T0081082.1-909No protein-
 
Retained intron
--
MGP_CASTEiJ_T0081092.1-836No protein-
 
Retained intron
--
MGP_CASTEiJ_T0081090.1-573No protein-
 
Retained intron
--
MGP_CASTEiJ_T0081087.1-359No protein-
 
Retained intron
--
MGP_CASTEiJ_T0081080.1-1204291aaMGP_CASTEiJ_P0081080
 
Unknown likely coding
--
Statistics

Exons: 28, Coding exons: 27, Transcript length: 3,332 bps, Translation length: 1,052 residues

Version

MGP_CASTEiJ_T0081083.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.