Transcript: MGP_CASTEiJ_T0060821.1

Description

doublecortin-like kinase 1 [Source:MGI Symbol;Acc:MGI:1330861]

Gene Synonyms

1700113D08Rik, 2810480F11Rik, AI836758, CPG16, Click-I, Cpg16, DCLK, Dcamkl1, Dcamkl1 {ECO:0000313|EMBL:EDL35301.1,GN ECO:0000313|MGI:MGI:1330861}, Dcamkl1GN, Dcl, Dclk, ania-4, mKIAA0369

Location

Chromosome 3: 53,951,088-53,984,680 forward strand.

Reference strain equivalent

Dclk1

About this transcript

This transcript has 4 exons and maps to 91 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0026391.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0060816.1	-	7835	756aa	MGP_CASTEiJ_P0060816	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0060815.1	-	7950	739aa	MGP_CASTEiJ_P0060815	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17359, CCDS50909, CCDS50910, CCDS79908, CCDS79909	A0A0G2JE54 A0A0G2JEN4 A0A0G2JGH1 A0A0G2JGQ6 A0A0G2JGR9 A8IP62 H7BX36 Q1EDH1 Q80VB6 Q8CCN4 Q9JLM8	-
MGP_CASTEiJ_T0060823.1	-	7000	422aa	MGP_CASTEiJ_P0060823	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060817.1	-	6021	363aa	MGP_CASTEiJ_P0060817	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060822.1	-	5192	56aa	MGP_CASTEiJ_P0060822	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060827.1	-	4319	449aa	MGP_CASTEiJ_P0060827	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060824.1	-	4286	432aa	MGP_CASTEiJ_P0060824	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060826.1	-	2928	421aa	MGP_CASTEiJ_P0060826	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060828.1	-	1662	452aa	MGP_CASTEiJ_P0060828	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060825.1	-	1499	382aa	MGP_CASTEiJ_P0060825	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060818.1	-	1013	247aa	MGP_CASTEiJ_P0060818	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0060830.1	-	911	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0060820.1	-	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0060821.1	-	1407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0060819.1	-	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,407 bps,

Version

MGP_CASTEiJ_T0060821.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CASTEiJ_T0060821.1

Summary

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Transcript: MGP_CASTEiJ_T0060821.1

Summary

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