Transcript: MGP_CASTEiJ_T0054203.1

Description

heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]

Gene Synonyms

78kDa, AL022860, AU019543, Bip, D2Wsu141e, D2Wsu17e, Grp78, Hsce70, SEZ-7, Sez7, XAP-1 antigen, baffled, mBiP

Location

Chromosome 2: 32,976,477-32,977,145 forward strand.

Reference strain equivalent

Hspa5

About this transcript

This transcript has 2 exons and maps to 248 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0024836.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0054197.1	-	3643	655aa	MGP_CASTEiJ_P0054197	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15950	A0A0A6YXF5 P20029	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0054199.1	-	2613	655aa	MGP_CASTEiJ_P0054199	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0054201.1	-	477	42aa	MGP_CASTEiJ_P0054201	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0054202.1	-	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0054203.1	-	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0054204.1	-	454	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0054198.1	-	2690	701aa	MGP_CASTEiJ_P0054198	Unknown likely coding		-	-
MGP_CASTEiJ_T0054200.1	-	2405	609aa	MGP_CASTEiJ_P0054200	Unknown likely coding		-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 574 bps,

Version

MGP_CASTEiJ_T0054203.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CASTEiJ_T0054203.1

Summary

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Transcript: MGP_CASTEiJ_T0054203.1

Summary

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