Transcript: MGP_CASTEiJ_T0043944.1

Description

RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein [Source:MGI Symbol;Acc:MGI:1915160]

Gene Synonyms

1700021K19Rik, 5330403K09, Kiaa0226, Rubicon, mKIAA0226

Location

Chromosome 16: 30,794,383-30,809,503 reverse strand.

Reference strain equivalent

Rubcn

About this transcript

This transcript has 12 exons and maps to 148 oligo probes.

Gene

This transcript is a product of gene MGP_CASTEiJ_G0022007.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0043941.1	-	5310	956aa	MGP_CASTEiJ_P0043941	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0043940.1	-	5295	941aa	MGP_CASTEiJ_P0043940	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28124, CCDS49832	D3Z7B1 Q80U62	-
MGP_CASTEiJ_T0043943.1	-	5255	941aa	MGP_CASTEiJ_P0043943	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0043945.1	-	3371	880aa	MGP_CASTEiJ_P0043945	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0043948.1	-	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_CASTEiJ_T0043942.1	-	2980	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0043944.1	-	2299	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0043946.1	-	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_CASTEiJ_T0043947.1	-	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 2,299 bps,

Version

MGP_CASTEiJ_T0043944.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_CASTEiJ_T0043944.1

Summary

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Transcript: MGP_CASTEiJ_T0043944.1

Summary

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