Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cacna1i MGP_CASTEiJ_G0021358

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Description

calcium channel, voltage-dependent, alpha 1I subunit [Source:MGI Symbol;Acc:MGI:2178051]

Gene Synonyms

Ca(V)3.3

Location

Chromosome 15: 80,707,512-80,833,003 forward strand.

CAST_EiJ_v1:CM004008.1

Reference strain equivalent

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_CASTEiJ_T0041564.1	-	9684	2199aa	MGP_CASTEiJ_P0041564	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49670	E0CXK2 E9Q7P2 F6TAX9 F6V0N5 F7BCE6 F7BQ85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CASTEiJ_T0041570.1	-	779	259aa	MGP_CASTEiJ_P0041570	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0041567.1	-	394	131aa	MGP_CASTEiJ_P0041567	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0041569.1	-	313	104aa	MGP_CASTEiJ_P0041569	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_CASTEiJ_T0041565.1	-	6815	1835aa	MGP_CASTEiJ_P0041565	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0041568.1	-	273	84aa	MGP_CASTEiJ_P0041568	Nonsense mediated decay		-	-
MGP_CASTEiJ_T0041566.1	-	9377	2214aa	MGP_CASTEiJ_P0041566	Unknown likely coding		-	-

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Summary

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