Mouse C57BL/6NJ (C57BL_6NJ_v1)
Description

ATPase, Ca++-sequestering [Source:MGI Symbol;Acc:MGI:1889008]

Gene Synonyms

1700121J11Rik, ATP2C1A, AW061228, BCPM, D930003G21Rik, HHD, PMR1, Pmr1, SPCA, pmr1

Reference strain equivalent
About this transcript

This transcript has 8 exons, is annotated with 11 domains and features and maps to 92 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0094565.1-4665952aaMGP_C57BL6NJ_P0094565
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0094563.1-5637918aaMGP_C57BL6NJ_P0094563
 
Protein coding
--
MGP_C57BL6NJ_T0094564.1-4872918aaMGP_C57BL6NJ_P0094564
 
Protein coding
--
MGP_C57BL6NJ_T0094560.1-2781926aaMGP_C57BL6NJ_P0094560
 
Protein coding
--
MGP_C57BL6NJ_T0094561.1-2664887aaMGP_C57BL6NJ_P0094561
 
Protein coding
--
MGP_C57BL6NJ_T0094569.1-2408669aaMGP_C57BL6NJ_P0094569
 
Protein coding
--
MGP_C57BL6NJ_T0094572.1-899253aaMGP_C57BL6NJ_P0094572
 
Protein coding
--
MGP_C57BL6NJ_T0094575.1-882230aaMGP_C57BL6NJ_P0094575
 
Protein coding
--
MGP_C57BL6NJ_T0094578.1-824144aaMGP_C57BL6NJ_P0094578
 
Protein coding
--
MGP_C57BL6NJ_T0094573.1-823208aaMGP_C57BL6NJ_P0094573
 
Protein coding
--
MGP_C57BL6NJ_T0094577.1-710177aaMGP_C57BL6NJ_P0094577
 
Protein coding
--
MGP_C57BL6NJ_T0094579.1-578111aaMGP_C57BL6NJ_P0094579
 
Protein coding
--
MGP_C57BL6NJ_T0094559.1-2476786aaMGP_C57BL6NJ_P0094559
 
Nonsense mediated decay
CCDS40752, CCDS57697, CCDS57698H3BIX7 H3BJ99 H3BJJ5
H3BJY0 H3BK57 H3BKB1
H3BL44 H3BLC2 H3BLI6
Q3UZR5 Q80XR2 Q8BMS7
-
MGP_C57BL6NJ_T0094566.1-1514No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0094571.1-1072No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0094576.1-833No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0094580.1-1449No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0094581.1-1413No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0094574.1-939No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0094568.1-691No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0094570.1-642No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0094567.1-255No protein-
 
Retained intron
--
Statistics

Exons: 8, Coding exons: 7, Transcript length: 710 bps, Translation length: 177 residues

Version

MGP_C57BL6NJ_T0094577.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.