Transcript: MGP_C57BL6NJ_T0090558.1

Description

NLR family, CARD domain containing 5 [Source:MGI Symbol;Acc:MGI:3612191]

Gene Synonyms

AI451557, AK220210, NOD27

Location

Chromosome 8: 99,396,085-99,429,153 forward strand.

Reference strain equivalent

Nlrc5

About this transcript

This transcript has 27 exons and maps to 199 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0034457.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0090556.1	-	6945	1915aa	MGP_C57BL6NJ_P0090556	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0090562.1	-	1723	138aa	MGP_C57BL6NJ_P0090562	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0090559.1	-	856	55aa	MGP_C57BL6NJ_P0090559	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0090558.1	-	3324	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0090561.1	-	1727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0090560.1	-	735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0090557.1	-	5337	1778aa	MGP_C57BL6NJ_P0090557	Unknown likely coding		-	-
MGP_C57BL6NJ_T0090555.1	-	5256	1751aa	MGP_C57BL6NJ_P0090555	Unknown likely coding	CCDS59741	C3VPR6 Q3U1H4 S4R1C5	-

Summary

Statistics

Exons: 27, Coding exons: 0, Transcript length: 3,324 bps,

Version

MGP_C57BL6NJ_T0090558.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0090558.1

Summary

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Transcript: MGP_C57BL6NJ_T0090558.1

Summary

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