Transcript: MGP_C57BL6NJ_T0088275.1

Description

lymphocyte specific 1 [Source:MGI Symbol;Acc:MGI:96832]

Gene Synonyms

Lsp-1, Pp52, S37, WP34, Wp34, leukocyte specific protein 1, leukocyte-specific protein 1, lymphocyte-specific protein 1, p50, pp52

Location

Chromosome 7: 153,073,392-153,089,882 forward strand.

Reference strain equivalent

Lsp1

About this transcript

This transcript has 3 exons and maps to 110 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0033751.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0088271.1	-	1727	330aa	MGP_C57BL6NJ_P0088271	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40193, CCDS52450, CCDS72072, CCDS72073	A2A6J4 A2A6J7 P19973	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0088274.1	-	1828	328aa	MGP_C57BL6NJ_P0088274	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0088272.1	-	1695	330aa	MGP_C57BL6NJ_P0088272	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0088276.1	-	1503	322aa	MGP_C57BL6NJ_P0088276	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0088273.1	-	1395	324aa	MGP_C57BL6NJ_P0088273	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0088278.1	-	1910	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0088279.1	-	739	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0088277.1	-	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0088280.1	-	325	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0088275.1	-	2665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0088282.1	-	689	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0088281.1	-	451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,665 bps,

Version

MGP_C57BL6NJ_T0088275.1

Type

Retained intron

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0088275.1

Summary

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Transcript: MGP_C57BL6NJ_T0088275.1

Summary

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