Transcript: MGP_C57BL6NJ_T0079252.1

Description

ankyrin repeat and BTB (POZ) domain containing 1 [Source:MGI Symbol;Acc:MGI:1933148]

Gene Synonyms

AI847549, BC003234, BPOZ, EF1ABP

Location

Chromosome 6: 92,667,238-92,669,681 reverse strand.

Reference strain equivalent

Abtb1

About this transcript

This transcript has 5 exons and maps to 70 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0031450.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0079248.1	-	1845	478aa	MGP_C57BL6NJ_P0079248	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20339	A0A0N4SUP1 A0A0N4SV19 A0A0N4SVH8 A0A0N4SVK7 A0A0N4SVV0 A0A0N4SW21 A0A0R4J0A1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0079250.1	-	4556	40aa	MGP_C57BL6NJ_P0079250	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079249.1	-	1774	36aa	MGP_C57BL6NJ_P0079249	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079255.1	-	783	40aa	MGP_C57BL6NJ_P0079255	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079257.1	-	645	43aa	MGP_C57BL6NJ_P0079257	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079254.1	-	596	47aa	MGP_C57BL6NJ_P0079254	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079253.1	-	579	22aa	MGP_C57BL6NJ_P0079253	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079259.1	-	465	40aa	MGP_C57BL6NJ_P0079259	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079252.1	-	438	15aa	MGP_C57BL6NJ_P0079252	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0079251.1	-	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0079258.1	-	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0079256.1	-	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 438 bps, Translation length: 15 residues

Version

MGP_C57BL6NJ_T0079252.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0079252.1

Summary

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Transcript: MGP_C57BL6NJ_T0079252.1

Summary

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