Transcript: MGP_C57BL6NJ_T0076409.1

Description

polymerase (RNA) I polypeptide D [Source:MGI Symbol;Acc:MGI:108403]

Gene Synonyms

1110003G10Rik, 16kDa, AC19, RPA16, Rpo1-3, Rpo1-3 {ECO:0000313|EMBL:EDL05825.1,GN ECO:0000313|MGI:MGI:108403}, Rpo1-3 {ECO:0000313|EMBL:EDL05826.1,GN ECO:0000313|MGI:MGI:108403}, mRPA16

Location

Chromosome 5: 158,292,419-158,327,753 forward strand.

Reference strain equivalent

Polr1d

About this transcript

This transcript has 4 exons and maps to 237 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0030821.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0076406.1	-	1196	133aa	MGP_C57BL6NJ_P0076406	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19876, CCDS39397	A0A0J9YUH6 A0A0J9YV27 P97304 Q545W2 Q9D1M1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0076408.1	-	1167	33aa	MGP_C57BL6NJ_P0076408	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0076407.1	-	1137	126aa	MGP_C57BL6NJ_P0076407	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0076409.1	-	1350	42aa	MGP_C57BL6NJ_P0076409	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0076411.1	-	878	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0076410.1	-	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,350 bps, Translation length: 42 residues

Version

MGP_C57BL6NJ_T0076409.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0076409.1

Summary

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Transcript: MGP_C57BL6NJ_T0076409.1

Summary

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