Transcript: MGP_C57BL6NJ_T0074631.1

Description

intraflagellar transport 81 [Source:MGI Symbol;Acc:MGI:1098597]

Gene Synonyms

AW060663, CDV-1R, Cdv-1, Cdv-1r, Cdv1

Location

Chromosome 5: 131,112,411-131,124,588 reverse strand.

Reference strain equivalent

Ift81

About this transcript

This transcript has 7 exons and maps to 68 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0030483.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0074625.1	-	2950	676aa	MGP_C57BL6NJ_P0074625	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19650	A0A0G2JFG8 A0A0G2JGC3 D3Z5A8 D6RHM7 O35594	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0074630.1	-	925	217aa	MGP_C57BL6NJ_P0074630	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0074628.1	-	593	197aa	MGP_C57BL6NJ_P0074628	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0074631.1	-	698	64aa	MGP_C57BL6NJ_P0074631	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0074633.1	-	450	59aa	MGP_C57BL6NJ_P0074633	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0074627.1	-	332	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0074632.1	-	2445	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0074626.1	-	1383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0074629.1	-	872	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 698 bps, Translation length: 64 residues

Version

MGP_C57BL6NJ_T0074631.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0074631.1

Summary

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Transcript: MGP_C57BL6NJ_T0074631.1

Summary

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